The detailed information of tRNA gene sequence


Sequence ID>WENV170226068
Genome IDCEQE01241254
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 200
End posion on genome 111
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgaatttttc
tRNA gene sequence 
GGAGAGGTCGCATAGCCCGGTTGAGTGCGCGCGCTTGGAGAGCGCGTGACCAGAAATGGT
CCGGGAGTTCGAATCTCCCCCTCTCCGCCA
Downstream region at tRNA end position 
ttttttacaa
Secondary structure (Cloverleaf model)
>WENV170226068	Ser	GGA
                   c      GCCA ttttttacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
    C C G A        C      | | | | |     G
  C         T A C G       G G G A G     C
  G         + | | |                 T T
  G         G T G C
    T T G A        G     TGACCAGAAATGGTCC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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