The detailed information of tRNA gene sequence


Sequence ID>WENV170226189
Genome IDCEQE01273622
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 146
End posion on genome 221
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
aacccccaaT
tRNA gene sequence 
GGGCTTGTAGCTCAATCTGGTAGAGCACCTGCTTTGCAAGCAGGGGGTTAGGTGTTCAAA
TCACCTCAAGTCCATtc
Downstream region at tRNA end position 
tccgttttta
Secondary structure (Cloverleaf model)
>WENV170226189	Ala	TGC
                   T      ATtc tccgttttta
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     T C C A C     A
      T A A        A      | | | | |     A
    C       C T C G       A G G T G     C
    T       | | | |                 T T
    G       G A G C
      G T A        A     GGGTT
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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