The detailed information of tRNA gene sequence


Sequence ID>WENV170226196
Genome IDCEQE01276156
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 741
End posion on genome 649
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttctattgc
tRNA gene sequence 
GCCGCTGTGGATAAGCTCGGTTTAAATCGTTGGTCTCATGGATTCAAAAATTGAGACAGC
CAAAGGTCGGGAGTTCAAATCTCCCCAGCGGCAatt
Downstream region at tRNA end position 
tctcagtacc
Secondary structure (Cloverleaf model)
>WENV170226196	Met	CAT
                   c      Aatt tctcagtacc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     C C C T C     A
    T C G A        G      | | | | |     A
  C         A T A G       G G G A G     C
  G           | | |                 T T
  G         A A T C
    T T T A        G     AAAATTGAGACAGCCAAAGGTC
                    T - A
                    T   C
                    G + T
                    G + T
                    T - A
                  C       G
                  T       G
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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