The detailed information of tRNA gene sequence


Sequence ID>WENV170226382
Genome IDCEQE01311533
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1241
End posion on genome 1167
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
ccaatgatgc
tRNA gene sequence 
GGAGGGGTGGCGGAGCGGTCACGCGTTCGCCTGCAGAGCGAATATACATGGGTTCAAATC
CCATCCCCTCCTCCA
Downstream region at tRNA end position 
attaaccctt
Secondary structure (Cloverleaf model)
>WENV170226382	Cys	GCA
                   c      TCCA attaaccctt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
        G A        G      | | | | |     A
      C     G G C G       A T G G G     C
      G       | | |                 T T
      G     A C G C
        T C        G     TATAC
                    T - A
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       G
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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