The detailed information of tRNA gene sequence


Sequence ID>WENV170226475
Genome IDCEQE01319084
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 864
End posion on genome 773
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
ctactttatT
tRNA gene sequence 
GGGCCGGTGGTGAAACCTGGTATCATGTTCCCTTGGCTTGGGAGACTCTAAATGCCCATA
AGACTTCGGGTTCAAATCCCGACCGGTCCATtt
Downstream region at tRNA end position 
ttccaaaact
Secondary structure (Cloverleaf model)
>WENV170226475	Ala	GGC
                   T      ATtt ttccaaaact
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     A G C C C     A
      C A A        G      | | | | |     A
    C       A G T G       T C G G G     C
    T       | | | +                 T T
    G       T C A T
      G T A        G     ACTCTAAATGCCCATAAGACT
                    T + G
                    T - A
                    C - G
                    C - G
                    C - G
                  T       T
                  T       T
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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