The detailed information of tRNA gene sequence


Sequence ID>WENV170226535
Genome IDCEQE01322597
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2685
End posion on genome 2596
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ctttcaacta
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGTTGAATGGGGCACCCTGCTAAGGTGTTGTGCCCGCAAGGGTA
CCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
aaaattaata
Secondary structure (Cloverleaf model)
>WENV170226535	Ser	GCT
                   a      GCCA aaaattaata
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G A C C       G A G G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TGTGCCCGCAAGGGTACC
                    G + T
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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