The detailed information of tRNA gene sequence


Sequence ID>WENV170226551
Genome IDCEQE01322977
Search identical group
Phylum/Class[CEQE] marine metagenome genome assembly TARA_037_MES_0.22-1.6 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1262
End posion on genome 1351
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
attataatat
tRNA gene sequence 
GGAGAGGTCGCATAGTGGCCTAGTGCGCTTGCTTGGAAAGCAAGTAGACCTGAAAGGGTC
TCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tttgattttt
Secondary structure (Cloverleaf model)
>WENV170226551	Ser	GGA
                   t      GCCA tttgattttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G A G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TAGACCTGAAAGGGTCTC
                    C - G
                    T - A
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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