The detailed information of tRNA gene sequence


Sequence ID>WENV170227034
Genome IDCEQF01038664
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 209
End posion on genome 284
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
ccccatacat
tRNA gene sequence 
GGACTGGTAGTTCAGTTGGTTAGAGCATCGGCCTGTCACGCCGAAGACACGGGTTCAAGT
CCCGTTCGGTCCGCCA
Downstream region at tRNA end position 
atttatttag
Secondary structure (Cloverleaf model)
>WENV170227034	Asp	GTC
                   t      GCCA atttatttag
                     G - C
                     G - C
                     A - T
                     C - G
                     T + G
                     G - C
                     G + T          T G
                    T     T G C C C     A
      T G A        A      | | | | |     A
    T       C T T G       A C G G G     C
    G       | | + |                 T T
    G       G A G C
      T T A        A     AGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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