The detailed information of tRNA gene sequence


Sequence ID>WENV170227134
Genome IDCEQF01048989
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 540
End posion on genome 632
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tttaatttgt
tRNA gene sequence 
GGAGGGATGGCTGAGCGGTTGAAGGCGGCGCACTCGAAATGCGTTGGGCGGGTTTTGCCT
GTCCCCAGGGTTCGAATCCCTGTCCCTCCGCCA
Downstream region at tRNA end position 
gttnnnnnnn
Secondary structure (Cloverleaf model)
>WENV170227134	Ser	CGA
                   t      GCCA gttnnnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     G T C C C     A
      C G A        G      | | | | |     G
    G       G T C G       C A G G G     C
    G         + | |                 T T
    T       A G G C
      T G A        G     TGGGCGGGTTTTGCCTGTCCC
                    G + T
                    C - G
                    G - C
                    C - G
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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