The detailed information of tRNA gene sequence


Sequence ID>WENV170227240
Genome IDCEQF01060258
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 935
End posion on genome 1025
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
aggaatatta
tRNA gene sequence 
GGAGAGGTGCCAGAGTGGCCGAATGGGCGCGACTGGAAATCGCGTGTTCCGTAACCCGGA
ACCATGGGTTCGAATCCCATCCTCTCCGCCA
Downstream region at tRNA end position 
tttagnnnnn
Secondary structure (Cloverleaf model)
>WENV170227240	Ser	GGA
                   a      GCCA tttagnnnnn
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        G      | | | | |     G
    G       G A C C       A T G G G     C
    G         | | |                 T T
    C       A T G G
      C G A        G     TGTTCCGTAACCCGGAACC
                    C - G
                    G - C
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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