The detailed information of tRNA gene sequence


Sequence ID>WENV170227294
Genome IDCEQF01066670
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 239
End posion on genome 165
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttcatggtta
tRNA gene sequence 
GGGGTCGTCGTCTAGTATGGCTATGATGCCAGCCTGGGGTGCTGGAGGTCGGAGGTTCAA
ATCCTCCCGATCCCAttt
Downstream region at tRNA end position 
tataatttta
Secondary structure (Cloverleaf model)
>WENV170227294	Pro	GGG
                   a      Attt tataatttta
                     G - C
                     G - C
                     G - C
                     G + T
                     T - A
                     C - G
                     G - C          T A
                    T     C C T C C     A
    A T G A        C      | | | | |     A
  T         T C T G       G G A G G     C
  G           | | +                 T T
  G         T G A T
    C T A          G     AGGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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