The detailed information of tRNA gene sequence


Sequence ID>WENV170227356
Genome IDCEQF01073693
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 384
End posion on genome 311
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
ctccgacccg
tRNA gene sequence 
GCCCCCATCGTCTAGCGGCCTAGGACACCACCCTCTCAAGGTGGCGGCACGGGTTCAAAT
CCCGTTGGGGGTACtc
Downstream region at tRNA end position 
aatagttttt
Secondary structure (Cloverleaf model)
>WENV170227356	Glu	CTC
                   g      ACtc aatagttttt
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     C - G
                     A - T          T A
                    T     T G C C C     A
      C G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    C       G G A C
      C T A        A     CGGC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  C       A
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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