The detailed information of tRNA gene sequence


Sequence ID>WENV170227442
Genome IDCEQF01087049
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 155
End posion on genome 230
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
aatgggctcg
tRNA gene sequence 
GGGGATATAGCTCAATTGGGAGAGCGCGGCGTTCGCAATGCCGAGGTTGGGGGTTCGAGT
CCCCCTATCTCCACCA
Downstream region at tRNA end position 
cccgtaacgt
Secondary structure (Cloverleaf model)
>WENV170227442	Ala	CGC
                   g      ACCA cccgtaacgt
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     A - T          T G
                    T     C C C C C     A
      T A A        A      | | | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTT
                    C - G
                    G - C
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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