The detailed information of tRNA gene sequence


Sequence ID>WENV170227596
Genome IDCEQF01108851
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 195
End posion on genome 271
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
acattataaa
tRNA gene sequence 
GGGGGATTAGCTCAGTTGGCTAGAGCGCCTGCTTTGCAAGCAGGAGGTCATCGGTTCGAC
TCCGATATTCTCCACTA
Downstream region at tRNA end position 
aagagttctt
Secondary structure (Cloverleaf model)
>WENV170227596	Ala	TGC
                   a      ACTA aagagttctt
                     G - C
                     G - C
                     G + T
                     G - C
                     G + T
                     A - T
                     T - A          T C
                    T     T A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       A T C G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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