The detailed information of tRNA gene sequence


Sequence ID>WENV170227605
Genome IDCEQF01110057
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 198
End posion on genome 287
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atatttattt
tRNA gene sequence 
GGACAGGTGTCAGAGTGGTCGATTGTGCATCCTTGGAAAGGATGTGTTCTAGTAATAGAA
CCGGGAGTTCGAATCTCCCCCTGTCCGCCA
Downstream region at tRNA end position 
ttttttttgg
Secondary structure (Cloverleaf model)
>WENV170227605	Ser	GGA
                   t      GCCA ttttttttgg
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C
                     G - C          T A
                    T     C C C T C     A
      T G A        G      | | | | |     G
    G       G A C T       G G G A G     C
    G       + | |                   T T
    T       T T G T
      C G A        G     TGTTCTAGTAATAGAACC
                    C - G
                    A - T
                    T - A
                    C - G
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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