The detailed information of tRNA gene sequence


Sequence ID>WENV170227926
Genome IDCEQF01152615
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 551
End posion on genome 647
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttatggataa
tRNA gene sequence 
GGGAGTGGATGGGGTCCGGTGGCCCCTGCGGACTTCAAATCCGTTGTGTCTCGCTCAAAC
CGGGACGGGAGGGTTCGACTCCCTCTCACTCCCGCCA
Downstream region at tRNA end position 
gtaaatacta
Secondary structure (Cloverleaf model)
>WENV170227926	SeC(p)	TCA
                   a      GCCA gtaaatacta
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     G + T          T C
                    A     C T C C C     A
      C C T        T      | | | | |     G
    G       G G G G       G A G G G     C
    G       | | | |                 T T
    T       C C C C
      G G          T     TGTGTCTCGCTCAAACCGGGACGG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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