The detailed information of tRNA gene sequence


Sequence ID>WENV170227976
Genome IDCEQF01157319
Search identical group
Phylum/Class[CEQF] marine metagenome genome assembly TARA_068_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 388
End posion on genome 459
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttattattaa
tRNA gene sequence 
GGGCTTGTAGCTCAACGGCAGAGCATTCGGCTCATAACCGAACGGTTCCTGGTTCGAATC
CAGGCGGGCCCAtat
Downstream region at tRNA end position 
gagttgtatg
Secondary structure (Cloverleaf model)
>WENV170227976	Met	CAT
                   a      Atat gagttgtatg
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     T + G
                     G - C          T A
                    T     G G A C C     A
        A A        A      | | | | |     G
      C     C T C G       C C T G G     C
      G     | | | |                 T T
      G     G A G C
        C A        A     CGGTT
                    T - A
                    T - A
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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