The detailed information of tRNA gene sequence


Sequence ID>WENV170229200
Genome IDCEQG01086407
Search identical group
Phylum/Class[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4162
End posion on genome 4087
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
aaatagactT
tRNA gene sequence 
TTGTACGAGGTGTTAACTGGTTGCACACCTGGCTTGGGACCGGGAGGAAGTTGGTTCGAG
TCCAGCCGTACTGAGaa
Downstream region at tRNA end position 
attttattag
Secondary structure (Cloverleaf model)
>WENV170229200	Pro	TGG
                   T      AGaa attttattag
                     T + G
                     T   T
                     G - C
                     T - A
                     A - T
                     C - G
                     G - C          T G
                    A     C G A C C     A
      A A T        G      | + | | |     G
    C       T G T G       G T T G G     C
    T       + | | |                 T T
    G       G C A C
      G T T        A     AGGAA
                    C - G
                    C - G
                    T + G
                    G - C
                    G - C
                  C       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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