The detailed information of tRNA gene sequence


Sequence ID>WENV170229280
Genome IDCEQG01097461
Search identical group
Phylum/Class[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 155
End posion on genome 250
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaaattttcc
tRNA gene sequence 
cGGAGAGTGAAGGGTGCCTGGTGGTCCCCGCGGTCTTCAAAACCGTTGTCGGTTCGTGAA
CGGGCCGAGGTAGGTTCGATTCCTACCCTCTCCGCCAa
Downstream region at tRNA end position 
tttcccttcg
Secondary structure (Cloverleaf model)
>WENV170229280	SeC(p)	TCA
                   c      CCAa tttcccttcg
                     c - G
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     C A T C C     A
    C C G T        A      | | | | |     G
  T         G G G A       G T A G G     C
  G         + | |                   T T
  G         T C C C
    T G G          C     TGTCGGTTCGTGAACGGGCCGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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