The detailed information of tRNA gene sequence


Sequence ID>WENV170229731
Genome IDCEQG01152525
Search identical group
Phylum/Class[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 4696
End posion on genome 4782
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ctactttttt
tRNA gene sequence 
GGGCAAATGTCTGAGAGGTTTAAGGTTCCAGTCTTGAAAACTGGTAAGAATAATATTCTT
CGCAAGTTCGAATCTTGCTTTGTCCGCtt
Downstream region at tRNA end position 
atcttattct
Secondary structure (Cloverleaf model)
>WENV170229731	Ser	TGA
                   t      GCtt atcttattct
                     G - C
                     G - C
                     G + T
                     C - G
                     A - T
                     A - T
                     A - T          T A
                    T     C G T T C     A
      A G A        G      | | | | |     G
    G       G T C T       G C A A G     C
    G         + |                   T T
    T       A G G T
      T T A        T     TAAGAATAATATTCTTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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