The detailed information of tRNA gene sequence


Sequence ID>WENV170229836
Genome IDCEQG01197156
Search identical group
Phylum/Class[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 141
End posion on genome 232
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
accagcatgT
tRNA gene sequence 
GGAAGGGAATCTGTGCCGGTGTGCTGGCTGGTCTTCAAAACCAGTGAAGGCCGTAAGACG
GTCTTAGTGGGTTCGACTCCCACTCTCTTCCgcc
Downstream region at tRNA end position 
aacatttgag
Secondary structure (Cloverleaf model)
>WENV170229836	SeC(p)	TCA
                   T      Cgcc aacatttgag
                     G - C
                     G + T
                     A - T
                     A   C
                     G + T
                     G - C
                     G + T          T C
                    A     C A C C C     A
      C G T        A      | | | | |     G
    C       G T C T       G T G G G     C
    G             +                 T T
    G       G C T G
      T G T        G     TGAAGGCCGTAAGACGGTCTTA
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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