The detailed information of tRNA gene sequence


Sequence ID>WENV170229912
Genome IDCEQG01236780
Search identical group
Phylum/Class[CEQG] marine metagenome genome assembly TARA_076_MES_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 311
End posion on genome 238
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
aaaaattaaA
tRNA gene sequence 
AATTAGATCGTATAATGGTTAATACATGGGCCTGCAAAGCTTGTAATGATAGTTCGAATC
TATCTCTAGTCTTta
Downstream region at tRNA end position 
aattaaatta
Secondary structure (Cloverleaf model)
>WENV170229912	Cys	GCA
                   A      TTta aattaaatta
                     A   C
                     A - T
                     T + G
                     T - A
                     A - T
                     G - C
                     A - T          T A
                    T     C T A T C     A
      T A A        C      | | | | |     G
    G       T A T G       G A T A G     C
    G       | | | |                 T T
    T       A T A C
      T A          A     TAAT
                    T + G
                    G + T
                    G + T
                    G - C
                    C - G
                  C       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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