The detailed information of tRNA gene sequence


Sequence ID>WENV170230225
Genome IDCEQH01014113
Search identical group
Phylum/Class[CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 333
End posion on genome 259
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
gtgcgccagc
tRNA gene sequence 
GGACCGTTAGCTCAGTTGGCTAGAGCGCTCGCCTCACACGCGAGAGGTCACTGGTTCGAG
TCCAGTACGGTCCACtc
Downstream region at tRNA end position 
tgtgacctgc
Secondary structure (Cloverleaf model)
>WENV170230225	Val	CAC
                   c      ACtc tgtgacctgc
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        G     AGGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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