The detailed information of tRNA gene sequence


Sequence ID>WENV170231090
Genome IDCEQH01120205
Search identical group
Phylum/Class[CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1196
End posion on genome 1283
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taatattcaa
tRNA gene sequence 
GGAGAGGTGACAGAGTGGTCGATTGTGACGGTTTCGAAAACCGTTGTACCTTCGGGTACC
GTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
tctttgatca
Secondary structure (Cloverleaf model)
>WENV170231090	Ser	CGA
                   a      GCCA tctttgatca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C A       G T G G G     C
    G       + | | |                 T T
    T       T T G T
      C G A        G     TGTACCTTCGGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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