The detailed information of tRNA gene sequence


Sequence ID>WENV170231345
Genome IDCEQH01149406
Search identical group
Phylum/Class[CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 2204
End posion on genome 2295
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tccgagttcc
tRNA gene sequence 
GGAGAGGTGGGTGAGTGGCTGAAACCAGTTCCCTGCTAAGGAACCATACGCATATGCGCG
TATCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
tacacaaaaa
Secondary structure (Cloverleaf model)
>WENV170231345	Ser	GCT
                   c      GCCA tacacaaaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G A G G G     C
    G         | | |                 T T
    C       A A C C
      T G A        A     CATACGCATATGCGCGTATC
                    G - C
                    T - A
                    T - A
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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