The detailed information of tRNA gene sequence


Sequence ID>WENV170231398
Genome IDCEQH01150826
Search identical group
Phylum/Class[CEQH] marine metagenome genome assembly TARA_076_MES_0.22-3 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 54573
End posion on genome 54649
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
tcacacctat
tRNA gene sequence 
AGACTCGTAGCTCAGTTGGTTAGAGCGCCACCTTGACATGGTGGAGGTCGCCGGTTCAAA
TCCAGTCGAGTCTACCA
Downstream region at tRNA end position 
atttcatcgg
Secondary structure (Cloverleaf model)
>WENV170231398	Val	GAC
                   t      ACCA atttcatcgg
                     A - T
                     G - C
                     A - T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     T G A C C     A
      T G A        A      + |   | |     A
    T       C T C G       G C C G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    C - G
                    C - G
                    A - T
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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