The detailed information of tRNA gene sequence


Sequence ID>WENV170232463
Genome IDCEQI01062985
Search identical group
Phylum/Class[CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 129
End posion on genome 218
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ccaaaaaagT
tRNA gene sequence 
TGTTACGTGACAGAGTGGTTTATTGTGTCGGTTTGCTAAACCGAAATATCTTTTAAGATA
TCAAGGGTTCGAATCCCTTCGTAACAAACt
Downstream region at tRNA end position 
tttatttttt
Secondary structure (Cloverleaf model)
>WENV170232463	Ser	GCT
                   T      AACt tttatttttt
                     T - A
                     G - C
                     T - A
                     T - A
                     A - T
                     C - G
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G A C A       A A G G G     C
    G       + | | |                 T T
    T       T T G T
      T T A        G     AATATCTTTTAAGATATC
                    T - A
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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