The detailed information of tRNA gene sequence


Sequence ID>WENV170232834
Genome IDCEQI01101226
Search identical group
Phylum/Class[CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 214
End posion on genome 285
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgtgtctaa
tRNA gene sequence 
AGTAAAATAGAGTAACGGTTAGCTCGCTGGGCTCATAATCCGGAAGTAGAGGTTCGATTC
CTTTTTTTGCTAttt
Downstream region at tRNA end position 
gtaatctttt
Secondary structure (Cloverleaf model)
>WENV170232834	Met	CAT
                   a      Attt gtaatctttt
                     A - T
                     G - C
                     T + G
                     A - T
                     A - T
                     A - T
                     A - T          T T
                    T     T T T C C     A
      C A A        A      | + | | |     G
    G       T G A G       A G A G G     C
    G       + | | |                 T T
    T       G C T C
      T A          G     AAGT
                    C - G
                    T + G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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