The detailed information of tRNA gene sequence


Sequence ID>WENV170232884
Genome IDCEQI01136511
Search identical group
Phylum/Class[CEQI] marine metagenome genome assembly TARA_076_SRF_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 553
End posion on genome 480
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aaataacatt
tRNA gene sequence 
GGTCTCTTAGTTTAATGGTAGAACTTGTCTCTGTCTAAGACGAAGTAGGGGTTCGATTCC
CCTAGAGACCGCCA
Downstream region at tRNA end position 
gaaatcacaa
Secondary structure (Cloverleaf model)
>WENV170232884	Asp	GTC
                   t      GCCA gaaatcacaa
                     G - C
                     G - C
                     T - A
                     C - G
                     T - A
                     C - G
                     T - A          T T
                    T     T C C C C     A
        A A        A      | | | | |     G
      T     T T T G       A G G G G     C
      G     + | | |                 T T
      G     G A A C
        T A        T     AAGT
                    T + G
                    G - C
                    T - A
                    C - G
                    T - A
                  C       A
                  T       T
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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