The detailed information of tRNA gene sequence


Sequence ID>WENV170236706
Genome IDCEQM01005848
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 400
End posion on genome 489
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ccgctaatat
tRNA gene sequence 
GGAGAGGTGGTCGAGTGGTTTAAGGCTCTAGTCTTGAAAACTAGCGTGTCTGCAAGGGCA
CCGTGGGTTCGAATCCCACCCTCTCCGCCA
Downstream region at tRNA end position 
cgaggtgtag
Secondary structure (Cloverleaf model)
>WENV170236706	Ser	TGA
                   t      GCCA cgaggtgtag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G C T G       G T G G G     C
    G         | + |                 T T
    T       A G G C
      T T A        T     CGTGTCTGCAAGGGCACC
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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