The detailed information of tRNA gene sequence


Sequence ID>WENV170236841
Genome IDCEQM01013435
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 3790
End posion on genome 3865
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
gttcaatcac
tRNA gene sequence 
GGGTCCGTGGTCTAGCGGTTATGACGTCGCCCTTACAAGGCGAATATCACCAGTTCAAAT
CTGGTCGGTCCCACTA
Downstream region at tRNA end position 
ttgttcttca
Secondary structure (Cloverleaf model)
>WENV170236841	Val	TAC
                   c      ACTA ttgttcttca
                     G - C
                     G - C
                     G - C
                     T   T
                     C - G
                     C - G
                     G - C          T A
                    T     T G G T C     A
      C G A        G      | | | | |     A
    G       T C T G       A C C A G     C
    G         | | |                 T T
    T       T G A C
      T A          G     ATATC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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