The detailed information of tRNA gene sequence


Sequence ID>WENV170237127
Genome IDCEQM01032112
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 322
End posion on genome 246
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tgtattgttt
tRNA gene sequence 
CGGGGTGTGGCGCAGCTCGGTAGCGCGCGCGCATGGGGTGCGCGAGGCCCCCGGTTCGAA
TCCGGGCACCCCGACCA
Downstream region at tRNA end position 
ttgtgccttg
Secondary structure (Cloverleaf model)
>WENV170237127	Pro	GGG
                   t      ACCA ttgtgccttg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     G G G C C     A
      C G A        G      | | | | |     G
    T       C G C G       C C C G G     C
    C       | | | |                 T T
    G       G C G C
      G T A        G     AGGCC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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