The detailed information of tRNA gene sequence


Sequence ID>WENV170237189
Genome IDCEQM01037275
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 7015
End posion on genome 6918
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
taacgaactt
tRNA gene sequence 
GGGGGTGGATGGGTCCTGGTGGGTCTCGCGGTCTTCAAAACCGTTGCGAGGACGGCTTCC
CGTTCTTGGGTGGGTTCGACTCCCACGCACTCCCGCCA
Downstream region at tRNA end position 
tggtattaga
Secondary structure (Cloverleaf model)
>WENV170237189	SeC(p)	TCA
                   t      GCCA tggtattaga
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     G   G          T C
                    A     C A C C C     A
      T C C        T      | | | | |     G
    G       T G G G       G T G G G     C
    G       + + | +                 T T
    T       G T C T
      G G          C     TGCGAGGACGGCTTCCCGTTCTTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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