The detailed information of tRNA gene sequence


Sequence ID>WENV170237229
Genome IDCEQM01040133
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 442
End posion on genome 516
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
agcttgtttT
tRNA gene sequence 
GCCCCTATCGTCTAGTGGCCTAGGATATCGCCCTCTCACGGCGAAGACCGGGGTTCGAGT
CCCCGTAGGGGTATgc
Downstream region at tRNA end position 
ggttgaggtc
Secondary structure (Cloverleaf model)
>WENV170237229	Glu	CTC
                   T      ATgc ggttgaggtc
                     G + T
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T G
                    T     G C C C C     A
      T G A        C      | | | | |     G
    G       T C T G       C G G G G     C
    G       + | | +                 T T
    C       G G A T
      C T A        A     AGAC
                    T - A
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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