The detailed information of tRNA gene sequence


Sequence ID>WENV170237304
Genome IDCEQM01045397
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 445
End posion on genome 519
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tattggaaag
tRNA gene sequence 
CAGGGTATAGCGCAGCTTGGTAGCGTATCTGTTTTGGGTACAGAAGGTCGCAGGTTCAAC
TCCTGCTACCCTGACtg
Downstream region at tRNA end position 
ttttttgaaa
Secondary structure (Cloverleaf model)
>WENV170237304	Pro	TGG
                   g      ACtg ttttttgaaa
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T          T C
                    T     C G T C C     A
      C G A        A      | | | | |     A
    T       C G C G       G C A G G     C
    T       | | | +                 T T
    G       G C G T
      G T A        A     AGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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