The detailed information of tRNA gene sequence


Sequence ID>WENV170237329
Genome IDCEQM01046700
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 734
End posion on genome 643
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttcatgtcc
tRNA gene sequence 
GGAGGGTTGTCCGAGTCTGGTTTAAGGAGCTGGTCTTGAAAACCAGTGTGGCTTCGCGGT
CACCGTGGGTTCGAATCCCACACCCTCCGCCA
Downstream region at tRNA end position 
attatcacaa
Secondary structure (Cloverleaf model)
>WENV170237329	Ser	TGA
                   c      GCCA attatcacaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     C A C C C     A
    C T G A        G      | | | | |     G
  T         G C C T       G T G G G     C
  G           | | |                 T T
  G         A G G A
    T T T A        G     TGTGGCTTCGCGGTCACC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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