The detailed information of tRNA gene sequence


Sequence ID>WENV170237865
Genome IDCEQM01091958
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 204
End posion on genome 279
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
ttataattaa
tRNA gene sequence 
GCCCTTGTAGTTCAAAAGGATAGAACAATTGCCTCCTAAGCAATGGATCCCTGTTCGATT
CGGGGCGAGGGTACAA
Downstream region at tRNA end position 
taaaggagat
Secondary structure (Cloverleaf model)
>WENV170237865	Arg	CCT
                   a      ACAA taaaggagat
                     G + T
                     C - G
                     C - G
                     C - G
                     T - A
                     T + G
                     G - C          T T
                    T     G G G G C     A
      A A A        A      | | | + |     G
    A       C T T G       C C C T G     C
    G       | | | |                 T T
    G       G A A C
      A T A        A     GGAT
                    A - T
                    T - A
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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