The detailed information of tRNA gene sequence


Sequence ID>WENV170237958
Genome IDCEQM01101881
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 281
End posion on genome 204
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
cgctttggtt
tRNA gene sequence 
AACGAGGTGGGGTAGTCTGGATATCCCGTCGGGCTCATAACCCGGAGATCGGTGGTTCAA
ATCCATCCCTCGTTACCA
Downstream region at tRNA end position 
atcaacagac
Secondary structure (Cloverleaf model)
>WENV170237958	Met	CAT
                   t      ACCA atcaacagac
                     A - T
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T A C C     A
    C T G A        G      | + | | |     A
  T         T G G G       G G T G G     C
  G           | | |                 T T
  G         T C C C
    A T A          G     AGATC
                    T + G
                    C - G
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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