The detailed information of tRNA gene sequence


Sequence ID>WENV170238009
Genome IDCEQM01107849
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 271
End posion on genome 342
Amino Acid Thr
Anticodon AGT
Upstream region at tRNA start position 
agcagagaaa
tRNA gene sequence 
GCTTTTATCGTCCAATGGTTAGGACACCTGTCTAGTAAACAGGAAATCAGAGTTCGATTC
TCTGTGAAAGCAata
Downstream region at tRNA end position 
taaattatat
Secondary structure (Cloverleaf model)
>WENV170238009	Thr	AGT
                   a      Aata taaattatat
                     G - C
                     C - G
                     T - A
                     T - A
                     T - A
                     T + G
                     A - T          T T
                    T     G T C T C     A
      T A A        C      | | | | |     G
    G       C C T G       C A G A G     C
    G       | | | |                 T T
    T       G G A C
      T A          A     AAAT
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    A G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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