The detailed information of tRNA gene sequence


Sequence ID>WENV170238062
Genome IDCEQM01113037
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 238
End posion on genome 153
Amino Acid Leu
Anticodon TAA
Upstream region at tRNA start position 
gccgtgttat
tRNA gene sequence 
ACTGGGGTGGCTGAGGTGGTTAAAGGCGCCGGGCTTAAGATCCGGTCACTATGTGTTCGA
GGGTTCAAATCCCTCCCCCAGTACCA
Downstream region at tRNA end position 
ttaagttatt
Secondary structure (Cloverleaf model)
>WENV170238062	Leu	TAA
                   t      ACCA ttaagttatt
                     A - T
                     C - G
                     T - A
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T G G A        G      | | | | |     A
  G         G T C G       G A G G G     C
  G           + | |                 T T
  T         A G G C
    T A A          G     TCACTATGTGTTC
                    C - G
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       G
                    T A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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