The detailed information of tRNA gene sequence


Sequence ID>WENV170238216
Genome IDCEQM01124393
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 1191
End posion on genome 1117
Amino Acid Arg
Anticodon GCG
Upstream region at tRNA start position 
atgcttcttT
tRNA gene sequence 
GCGCTCGTAGCTCAACTGGCAGAGCGTCGGCTTGCGGAGCCGAAGGTTGTAGGTTCAAGT
CCTACCGGGCGTGTtt
Downstream region at tRNA end position 
tgcaactgga
Secondary structure (Cloverleaf model)
>WENV170238216	Arg	GCG
                   T      GTtt tgcaactgga
                     G + T
                     C - G
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T G
                    T     C A T C C     A
      C A A        A      | | | | |     A
    T       C T C G       G T A G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       G
                    G C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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