The detailed information of tRNA gene sequence


Sequence ID>WENV170238222
Genome IDCEQM01124621
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 450
End posion on genome 374
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
aaacaacgtt
tRNA gene sequence 
GGGCTCGTAGCTCAGTCAGGTAGAGCGTCGGACTTTTAATCCGATGGTCGCGGGTTCGAA
CCCCGTCGGGCCCGCCT
Downstream region at tRNA end position 
gctgcgcttc
Secondary structure (Cloverleaf model)
>WENV170238222	Lys	TTT
                   t      GCCT gctgcgcttc
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          C A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    C       C T C G       G C G G G     C
    A       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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