The detailed information of tRNA gene sequence


Sequence ID>WENV170238327
Genome IDCEQM01131934
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 108
End posion on genome 34
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
aatattatta
tRNA gene sequence 
GGGTGTGTAGCTCAGTGGGAGAGCGCTACGTTGACATCGTAGAGGTCGATGGTTCGATAC
CGTCCACACCCACCA
Downstream region at tRNA end position 
tttatccatc
Secondary structure (Cloverleaf model)
>WENV170238327	Val	GAC
                   a      ACCA tttatccatc
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C
                     T - A
                     G - C          A T
                    T     C T G C C     A
        G A        A      | | + | |     G
      T     C T C G       G A T G G     C
      G     | | | |                 T T
      G     G A G C
        G A        G     AGGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    G - C
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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