The detailed information of tRNA gene sequence


Sequence ID>WENV170238402
Genome IDCEQM01134118
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 837
End posion on genome 929
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
attcgtctag
tRNA gene sequence 
GGAGGGATCGCATAGTGGCCTAGTGCGCCCGCCTGCTAAGCGGGTTGGGGGTGATGAGCT
CCCTCGCGGGTTCGAATCCCGCTCCCTCCGCCA
Downstream region at tRNA end position 
gtaaaatcaa
Secondary structure (Cloverleaf model)
>WENV170238402	Ser	GCT
                   g      GCCA gtaaaatcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C G C C C     A
      T G A        C      | | | | |     G
    G       T A C G       G C G G G     C
    G       + | | |                 T T
    C       G T G C
      C T A        G     TTGGGGGTGATGAGCTCCCTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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