The detailed information of tRNA gene sequence


Sequence ID>WENV170238485
Genome IDCEQM01142642
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 190
End posion on genome 264
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggagtcgtgc
tRNA gene sequence 
GGCAGGGTAGCTCAGGGGTAGAGCAGCGGATTCATAAGCCGCGGGTCGCGGGTTCAAATC
CCGCCCCTGCCACCA
Downstream region at tRNA end position 
tcgactgcta
Secondary structure (Cloverleaf model)
>WENV170238485	Met	CAT
                   c      ACCA tcgactgcta
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     A
      G     C T C G       G C G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A   G
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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