The detailed information of tRNA gene sequence


Sequence ID>WENV170238554
Genome IDCEQM01171421
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 398
End posion on genome 487
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
agcttgaatg
tRNA gene sequence 
GGAGGGGTGCCGGAGTGGTTGAACGGGGCAGTCTCGAAAACTGTTGAGCGTGTAAGCGTT
CCGAGAGTTCGAATCTCTCTCCCTCCGCCA
Downstream region at tRNA end position 
caatttttta
Secondary structure (Cloverleaf model)
>WENV170238554	Ser	CGA
                   g      GCCA caatttttta
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G + T          T A
                    T     C T C T C     A
      T G A        G      | | | | |     G
    G       G G C C       G A G A G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGAGCGTGTAAGCGTTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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