The detailed information of tRNA gene sequence


Sequence ID>WENV170238571
Genome IDCEQM01178088
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 380
End posion on genome 295
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gcgaatgctt
tRNA gene sequence 
GCGGCGATCGCATAGCCTGGCCATTGCGTCGGATTGCTAATCCGATGGGTCTTCCCACGG
GGGTTCGAATCCCCCTCGCCGCGCCT
Downstream region at tRNA end position 
taatgcaatc
Secondary structure (Cloverleaf model)
>WENV170238571	Ser	GCT
                   t      GCCT taatgcaatc
                     G - C
                     C - G
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T          T A
                    T     C C C C C     A
    C C G A        C      | | | | |     G
  T         T A C G       G G G G G     C
  G           | | |                 T T
  G         T T G C
    C C A          G     TGGGTCTTCCCAC
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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