The detailed information of tRNA gene sequence


Sequence ID>WENV170238626
Genome IDCEQM01197257
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 293
End posion on genome 217
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tagcgtgttt
tRNA gene sequence 
GGGGGCTTAGCTTAGTGGCCTAAAGCTCCGGTCTCATAAACCGGCGAGCCTGGGTTCGAA
TCCCAGAGCCCCCACCA
Downstream region at tRNA end position 
cgctgaaact
Secondary structure (Cloverleaf model)
>WENV170238626	Met	CAT
                   t      ACCA cgctgaaact
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A          T A
                    T     G A C C C     A
      T G A        A      | | | | |     G
    G       T T C G       C T G G G     C
    G       | | | |                 T T
    C       A A G C
      C T A        T     CGAGC
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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