The detailed information of tRNA gene sequence


Sequence ID>WENV170238653
Genome IDCEQM01207583
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 159
End posion on genome 65
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
aatgattaat
tRNA gene sequence 
GGAAGCGAATGTAATCCTGGTGGATACCACGGCCTTCAAAGCCGCTGTCCCGATGTAAAT
TGGGAGGTGGGTTCGATTCCCACACGTTTCCGCAA
Downstream region at tRNA end position 
caattatatt
Secondary structure (Cloverleaf model)
>WENV170238653	SeC	TCA
                   t      GCAA caattatatt
                     G - C
                     G - C
                     A - T
                     A - T
                     G + T
                     C - G
                     G - C
                     A   A          T T
                    A     C A C C C     A
      C C T        T      | | | | |     G
    T       A A T G       G T G G G     C
    G         | | |                 T T
    G       A T A C
      T G G        C     TGTCCCGATGTAAATTGGGAG
                    A   C
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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