The detailed information of tRNA gene sequence


Sequence ID>WENV170238688
Genome IDCEQM01219927
Search identical group
Phylum/Class[CEQM] marine metagenome genome assembly TARA_078_DCM_0.45-0.8 ,contig; saline water (ENVO:00002010), including plankton (ENVO:xxxxxxxx)
Species
Start position on genome 663
End posion on genome 590
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
tagtctgttt
tRNA gene sequence 
GTCCCATTCGTCTAGTGGACTAGGACATCGGCTTTTCACGCCGAAGACAGGAGTTCAATT
CTCCTATGGGATACtt
Downstream region at tRNA end position 
atggaaatta
Secondary structure (Cloverleaf model)
>WENV170238688	Glu	TTC
                   t      ACtt atggaaatta
                     G + T
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T
                     T - A          T T
                    T     T C C T C     A
      T G A        C      | | | | |     A
    G       T C T G       A G G A G     C
    G       + | | |                 T T
    A       G G A C
      C T A        A     AGAC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  T       C
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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